Grants
Research at TMU AIBioMed Lab is supported by competitive research grants and institutional funding from the National Science and Technology Council (NSTC), Ministry of Education (MOE), National Health Research Institutes (NHRI), Taipei Medical University (TMU), and collaborating institutions.
The following projects highlight our research activities in artificial intelligence, bioinformatics, computational biology, medical imaging, genomics, and interdisciplinary biomedical research:
Toward trustworthy large language model-assisted cell type annotation in single-cell RNA sequencing
- Principal Investigator | August 2026 - July 2029
- Funded by: National Science and Technology Council (NSTC), Taiwan
Artificial Intelligence–Assisted Stool Phenotyping and Gut Biomarkers for Predicting Sleep Disturbances in Children with Constipation Spectrum Disorders: An Integrative Multimodal Study
- Co-Investigator | August 2026 - July 2029
- Funded by: National Science and Technology Council (NSTC), Taiwan
Foundation Models in Action: Transforming Protein-Ligand Interaction Predictions for Drug Design
- Principal Investigator | August 2025 - July 2026
- Funded by: National Science and Technology Council (NSTC), Taiwan
Assessment of Nutritional Deficiency Patterns and Pharmacotherapy Outcomes in Patients admitted to Emergency and Intensive Care Units
- Co-Investigator | August 2024 - July 2027
- Funded by: National Science and Technology Council (NSTC), Taiwan
A Microbial Insights and Stool Imaging Approach to the Interplay Between Gastrointestinal Discomforts and Sleep Disturbances in Children: A Pathway to Personalized Pediatric Care
- Co-Investigator | August 2025 - July 2026
- Funded by: National Science and Technology Council (NSTC), Taiwan
Towards interpretable genotyping of non-small cell lung cancer: an explainable AI approach leveraging CT-based radiomics
- Principal Investigator | January 2023 - December 2024
- Funded by: Higher Education Sprout Project, Ministry of Education (MOE), Taiwan
The Development and Validation of a Prediction Algorithm for First-Onset and Recurrence of Major Depression in General Population: A Genetic, Epigenetic and Drug Repurposing Approach
- Co-Investigator | January 2023 - December 2023
- Funded by: Higher Education Sprout Project, Ministry of Education (MOE), Taiwan
Develop IL-19 antibody immunotherapy and unravel immunosuppressive mechanism in peritumoral region of glioblastoma by single cell transcriptome analysis
- Co-Investigator | January 2023 - December 2025
- Funded by: National Health Research Institutes (NHRI), Taiwan
Sequence-based protein function prediction using graph transformers and deep representative learning
- Principal Investigator | August 2022 - July 2025
- Funded by: National Science and Technology Council (NSTC), Taiwan
Development of innovation optoelectronic AI detection technology, antibacterial materials, and machine learning database construction for catheterization-associated urinary tract infection in patients
- Co-Investigator | May 2022 - April 2023
- Funded by: Taipei Medical University Hospital (TMUH) - Taipei Medical University (TMU), Taiwan
The application of artificial inteligence to predict the clinical outcome through MRI imaging in patients with nasopharyngeal carcinoma
- Co-Investigator | May 2022 - April 2023
- Funded by: Wan Fang Hospital (WFH) - Taipei Medical University (TMU), Taiwan
Incorporating transfer learning and CT radiomics in classifying molecular subtypes of NSCLC
- Principal Investigator | January 2022 – December 2022
- Funded by: Higher Education Sprout Project, Ministry of Education (MOE), Taiwan
The development and validation of a prediction algorithm for first onset of major depression in general population: a genetic, epigenetic and drug-driven approach
- Co-Investigator | January 2022 – December 2022
- Funded by: Higher Education Sprout Project, Ministry of Education (MOE), Taiwan
Machine learning algorithm for classification of Ductal carcinoma in situ and minimal invasive breast cancer on mammography
- Co-Investigator | January 2022 – December 2022
- Funded by: Higher Education Sprout Project, Ministry of Education (MOE), Taiwan
Research Grant for “110 Top International Journal Award”
- Principal Investigator | January 2022 – December 2022
- Funded by: Taipei Medical University (TMU), Taiwan
DeepNLP-DNA: a pre-trained NLP model for DNA sequence representation using deep transformers and 2D convolutional neural networks
- Principal Investigator | August 2021 – July 2023
- Funded by: Ministry of Science and Technology (MOST), Taiwan
Incorporating radiogenomics and NLP to improve the predictive performance of lung cancer recurrence
- Principal Investigator | January 2021 – December 2021
- Funded by: Higher Education Sprout Project, Ministry of Education (MOE), Taiwan
An artificial intelligence system for precision lung cancer based on clinical big data
- Co-Investigator | May 2020 – April 2024
- Funded by: Ministry of Science and Technology (MOST), Taiwan
Incorporating radiogenomics and NLP to improve the predictive performance of lung cancer recurrence
- Principal Investigator | January 2020 – December 2020
- Funded by: Higher Education Sprout Project, Ministry of Education (MOE), Taiwan
Research Grant for Newly Hired Faculty
- Principal Investigator | January 2020 – December 2021
- Funded by: Taipei Medical University (TMU), Taiwan
GPU Grant
- Principal Investigator
- Funded by: NVIDIA Corporation (USA)
